Comp6OSS 24 Weeks P2...1	Comp6OSS 24 Weeks P2...2	Comp6OSS 24 Weeks P2...3	Comp6OSS 24 Weeks P2...4	Comp6OSS 24 Weeks P2...5	Comp6OSS 24 Weeks P2...6
1	Coefficients	Standard Errors	Test Statistics W	p Values	Adjusted p Values	Differential Abundance
Selenomonas sputigena (SP1) 	0.842071804430334	1.13329162964176	0.743031874943361	0.457462382603593	1	FALSE
Megasphaera micronuciformis (SP101) 	0.210030565598243	0.844157987610783	0.248804807489521	0.803511772189705	1	FALSE
Catonella morbi (SP103) 	-1.60923936910067	0.918978748015626	-1.75111706617322	0.079925747101228	1	FALSE
Leptotrichia sp._HMT_223 (SP105) 	-0.57239821355973	0.858401104152734	-0.666819055556439	0.504887719385813	1	FALSE
Stomatobaculum longum (SP106) 	-1.27062589003091	1.00116547552421	-1.26914673057979	0.204388735974462	1	FALSE
Oribacterium sp._HMT_078 (SP107) 	-0.319234048569294	1.05719855768661	-0.301962243750929	0.762680845329371	1	FALSE
Olsenella sp._HMT_807 (SP108) 	1.62864144601759	1.15029982143187	1.41584082312583	0.156822114193536	1	FALSE
Eikenella corrodens (SP109) 	1.23661008968852	0.818730888935876	1.51039872368291	0.130941714114173	1	FALSE
Prevotella veroralis (SP111) 	-1.91060356444126	0.776034271005353	-2.46200926405747	0	0	TRUE
Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP116) 	-0.53989300791595	0.818515758743312	-0.659600016430791	0.509510543718167	1	FALSE
Olsenella uli (SP118) 	0.26254436733411	0.750794531471634	0.349688704870421	0.726572331357173	1	FALSE
Streptococcus mitis (SP12) 	-0.146804205462689	1.34429364414836	-0.10920545976076	0.913039529948917	1	FALSE
Streptococcus parasanguinis_clade_411 (SP120) 	-0.382872323816124	1.3076550990978	-0.29279304923774	0.769680341457769	1	FALSE
Leptotrichia sp._HMT_417 (SP121) 	0.397120050185708	0.705022271640085	0.563273056980019	0.573248961841724	1	FALSE
Treponema maltophilum (SP122) 	0.32239632468017	0.582622900036013	0.553353334824707	0.580021486428578	1	FALSE
Streptococcus sanguinis (SP123) 	1.23165569669091	1.34006490832014	0.919101521906781	0.358042473307069	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP125) 	-0.235612231068608	1.08809431594581	-0.216536588433334	0.828569508150328	1	FALSE
Actinomyces israelii (SP126) 	1.27959798438028	1.05445797930534	1.21351254340478	0.224933921622385	1	FALSE
Streptococcus mutans (SP128) 	1.24687242357535	1.59802146442962	0.78026012248865	0.435237779991342	1	FALSE
Streptococcus oralis (SP131) 	-0.809024981836657	1.15179443639601	-0.702403967471932	0.482427271758358	1	FALSE
Capnocytophaga sp._HMT_864 (SP132) 	-0.17897030539242	0.806793066520845	-0.221829255628334	0.824446804087298	1	FALSE
Campylobacter showae (SP134) 	0.839181382640896	1.01966282702166	0.822998897676859	0.410508620283584	1	FALSE
Streptococcus intermedius (SP136) 	0.2701404747605	1.42811373299519	0.18915893637822	0.849968250613998	1	FALSE
Streptococcus oralis_subsp._tigurinus_clade_070 (SP138) 	-2.15461416867618	1.01471061604522	-2.12337797063134	0.033722191687348	1	FALSE
Leptotrichia sp._HMT_215 (SP139) 	-0.61890783269327	0.791106412012467	-0.782331963558294	0.434019506796701	1	FALSE
Peptostreptococcus stomatis (SP140) 	-0.723446227262899	0.949408321505529	-0.761996931010349	0.446061835844964	1	FALSE
Abiotrophia defectiva (SP144) 	0.660808963881473	0.691913907219613	0.955045067003881	0.33955490688903	1	FALSE
Lautropia mirabilis (SP145) 	-0.399831951450514	0.97088096687277	-0.41182386419458	0.680468528516382	1	FALSE
Peptidiphaga sp._HMT_183 (SP146) 	0.837675783514559	1.13989738305615	0.734869468046927	0.462418994530093	1	FALSE
Rothia dentocariosa (SP147) 	2.40586980441486	1.47497558894881	1.63112516738632	0.102863911219332	1	FALSE
Porphyromonas catoniae (SP148) 	-1.1714189492871	0.836953732310096	-1.39962211059605	0.161626509249215	1	FALSE
Gemella morbillorum (SP15) 	-0.730675208733133	0.810833630866661	-0.901140728403371	0.367513500335697	1	FALSE
Prevotella pleuritidis (SP150) 	0.278438633712493	0.992431024435883	0.280562202164894	0.779046210282653	1	FALSE
Prevotella oulorum (SP151) 	0.646588170983045	0.918075888905047	0.70428619114941	0.48125456410643	1	FALSE
Tannerella forsythia (SP153) 	0.88875374395479	0.873211232222782	1.01779925768069	0.308773364885885	1	FALSE
Lachnospiraceae_[G-3] bacterium_HMT_100 (SP155) 	0.110878882787689	0.826694227726477	0.134123209124879	0.893305147228145	1	FALSE
Propionibacterium acidifaciens (SP159) 	-0.444313229374744	0.756992086132143	-0.586945672899919	0.557240193979923	1	FALSE
Rothia mucilaginosa (SP161) 	0.221438023833216	0.857796146865011	0.258147608429469	0.796292990166497	1	FALSE
Streptococcus anginosus (SP162) 	-1.11399127650194	1.18276799499835	-0.941851048737152	0.34626890505091	1	FALSE
Peptoanaerobacter [Eubacterium] yurii (SP164) 	0.644113549374512	0.745910357657011	0.863526753265292	0.387847916637384	1	FALSE
Parvimonas micra (SP166) 	0.394421131399196	1.21328502145019	0.325085305122914	0.745116510287918	1	FALSE
Fretibacterium sp._HMT_359 (SP170) 	0.271749986266794	0.756351966555244	0.359290381043712	0.719377869415291	1	FALSE
Leptotrichia hongkongensis (SP171) 	1.24987532206469	1.34428395541726	0.929770319007296	0.352490017073146	1	FALSE
Schaalia meyeri (SP173) 	1.48423119090208	0.913026325008902	1.62561708271403	0.104031138893791	1	FALSE
Porphyromonas gingivalis (SP176) 	-0.251777099291368	0.903996151145918	-0.278515676169873	0.780616533071593	1	FALSE
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP177) 	1.74563290362306	1.02328416674198	1.70591216043238	0.0880244353111959	1	FALSE
Bacteroidales_[G-2] bacterium_HMT_274 (SP18) 	-0.55140184670972	1.0495107392374	-0.525389427754097	0.599312501476398	1	FALSE
Porphyromonas endodontalis (SP180) 	-0.37570094284781	1.02065449914753	-0.368098061745284	0.712800116090229	1	FALSE
Capnocytophaga sputigena (SP181) 	0.32290393558623	0.69089622668591	0.467369661483223	0.640235424557318	1	FALSE
Arachnia propionica (SP182) 	1.37831615087393	0.890634761744277	1.54756608441214	0.121726802304115	1	FALSE
Campylobacter gracilis (SP185) 	1.30563234309172	0.873315694361025	1.49502906168085	0.134906857731567	1	FALSE
Streptococcus salivarius (SP188) 	-0.749402302648506	0.988211853192568	-0.75834174648629	0.448246421715995	1	FALSE
Desulfobulbus sp._HMT_041 (SP189) 	0.330643512645411	0.720041232457766	0.459200803705092	0.646089973479395	1	FALSE
Gemella haemolysans (SP190) 	0.210604014347606	0.739040617923209	0.284969471555472	0.775667530773621	1	FALSE
Clostridiales_[F-1][G-1] bacterium_HMT_093 (SP191) 	0.507813503251242	0.655728806782161	0.774426101154866	0.438678853391453	1	FALSE
Capnocytophaga sp._HMT_380 (SP192) 	0.414175956761156	0.764757537330586	0.541578129725733	0.588109161409238	1	FALSE
Fusobacterium nucleatum_subsp._vincentii (SP195) 	0.131903511703615	1.09479470541122	0.120482416522164	0.904101007758263	1	FALSE
Lachnoanaerobaculum orale (SP198) 	-1.46086282410812	0.835371544744255	-1.74875818227128	0	0	TRUE
Prevotella marshii (SP199) 	-0.54954714819197	0.764619961267246	-0.718719332518047	0.472313869186672	1	FALSE
Treponema denticola (SP2) 	-0.304020759042958	0.919790395367142	-0.330532652411102	0.740997524625504	1	FALSE
Fusobacterium nucleatum (SP20) 	0.059008482923175	0.761172999328752	0.0775230899877061	0.938207423390946	1	FALSE
Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP201) 	-0.488298928833345	0.685854785759415	-0.711956727534786	0.47649157244867	1	FALSE
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP204) 	-0.364857589365771	0.82705773536162	-0.44115129303064	0.659103471937544	1	FALSE
Porphyromonas sp._HMT_284 (SP209) 	-0.0790269421838339	0.654746939595442	-0.120698452187747	0.903929885008903	1	FALSE
Prevotella denticola (SP21) 	-0.672738399904297	1.01710643784029	-0.661423794871246	0.508340570339002	1	FALSE
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP211) 	-0.442046780199584	0.720883341252185	-0.613201547190343	0.539743081879184	1	FALSE
Tannerella sp._HMT_808 (SP212) 	-1.44387340119896	0.678345242154443	-2.1285229282558	0	0	TRUE
Selenomonas infelix (SP213) 	-1.15188938323829	0.813486870112148	-1.41599013525502	0.156778392724321	1	FALSE
Selenomonas sp._HMT_138 (SP219) 	0.720135003214921	0.705570079052927	1.0206427746788	0.307423715848763	1	FALSE
Mogibacterium timidum (SP22) 	0.668125418995539	0.932077444305368	0.716813203749888	0.473489363473105	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP222) 	0.308587652041744	1.03744806611306	0.297448770807303	0.766123913866686	1	FALSE
Lancefieldella rimae (SP227) 	-1.41047647121811	1.1462024795252	-1.23056484034338	0.218485662085662	1	FALSE
Capnocytophaga endodontalis (SP228) 	-0.871490057627913	1.10007414031498	-0.79221029355202	0.428238067557253	1	FALSE
Actinomyces sp._HMT_448 (SP230) 	0.110432780865605	1.68611536283124	0.0654953885718546	0.947779577841111	1	FALSE
Prevotella saccharolytica (SP233) 	0.258221663182888	0.626983933341417	0.411847336831638	0.680451322833512	1	FALSE
Aggregatibacter sp._HMT_458 (SP234) 	-0.158351165643534	0.776862459777066	-0.203834235585249	0.838483038318102	1	FALSE
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP238) 	-0.0652325390118393	1.04996337985895	-0.0621283944403879	0.950460585176705	1	FALSE
Selenomonas dianae (SP239) 	0.0777758433723954	0.770189703649336	0.100982709849113	0.919564185548624	1	FALSE
Corynebacterium durum (SP241) 	0.969982824012722	1.06579496542583	0.910102651521885	0.362768376354457	1	FALSE
Actinomyces naeslundii (SP244) 	2.08767249366592	0.818506944565533	2.5505861709873	0	0	TRUE
Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP247) 	0.770892041753	0.832793271040518	0.925670353687924	0.354617319165381	1	FALSE
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP250) 	0.583247388098993	0.871942615446346	0.66890570292912	0.503555632075659	1	FALSE
Lachnoanaerobaculum umeaense (SP254) 	-0.606126897973542	0.677063749398497	-0.89522869672468	0.370664847456945	1	FALSE
Bergeyella sp._HMT_900 (SP26) 	1.37751466505045	0.575036274077061	2.39552655571403	0	0	TRUE
Mogibacterium neglectum (SP263) 	-1.12600988161003	0.763833538640149	-1.47415611471403	0.140439562720393	1	FALSE
Schaalia sp._HMT_180 (SP266) 	-1.04203084047304	1.17780553720829	-0.88472231412914	0.376306417648634	1	FALSE
Scardovia wiggsiae (SP277) 	-0.870747214806164	1.20463765829923	-0.72282915016581	0.46978485591544	1	FALSE
Alloprevotella rava (SP28) 	-1.03205544385289	0.895986867156761	-1.15186447668359	0.249376767662112	1	FALSE
Selenomonas sp._HMT_134 (SP280) 	-0.559018368461894	0.849735292444475	-0.657873544187789	0.510619391747342	1	FALSE
Veillonellaceae_[G-1] bacterium_HMT_150 (SP294) 	0.691162314109513	0.745901515725735	0.926613365890586	0.354127312745575	1	FALSE
Kingella oralis (SP299) 	1.68670027970945	1.10358749267827	1.52837930014596	0.126418391211357	1	FALSE
Prevotella oralis (SP300) 	-0.34623573699063	0.940915540035158	-0.367977488157643	0.712890020140838	1	FALSE
Corynebacterium matruchotii (SP31) 	-0.227926992690828	1.33058153900616	-0.171298778773882	0.863988840669026	1	FALSE
Capnocytophaga leadbetteri (SP32) 	0.817146326782897	0.998362818771286	0.818486337250202	0.413079540415695	1	FALSE
Fretibacterium fastidiosum (SP33) 	0.623876665491664	0.902140949572593	0.691551210248507	0.489219210391153	1	FALSE
Prevotella salivae (SP331) 	-0.205277332381619	0.81718586869837	-0.251200296339668	0.801659255461811	1	FALSE
Alloprevotella sp._HMT_308 (SP335) 	0.273163675242844	0.555502131758805	0.491741902732157	0.622901811876135	1	FALSE
Lachnoanaerobaculum saburreum (SP34) 	0.934297627899005	1.07867114880776	0.866156130097365	0.386404547459994	1	FALSE
Selenomonas sp._HMT_479 (SP340) 	-0.573422103845064	0.70432437374793	-0.81414490995634	0.415561940703961	1	FALSE
Capnocytophaga sp._HMT_335 (SP341) 	-0.493453070848658	0.688789139578323	-0.71640657858042	0.473740334017066	1	FALSE
Phocaeicola abscessus (SP348) 	-0.0673447801223991	0.762356301768259	-0.0883376709370608	0.929608298895432	1	FALSE
Actinomyces johnsonii (SP351) 	-0.557578462463948	0.857382151763751	-0.650326649927262	0.515481246218094	1	FALSE
Lancefieldella parvula (SP353) 	-1.41174636773892	1.14123253000246	-1.23703656408732	0.216073508466393	1	FALSE
Filifactor alocis (SP356) 	1.28426471480538	0.834250635646057	1.53942311810266	0.123701033786268	1	FALSE
Tannerella sp._HMT_286 (SP36) 	0.423393002741121	0.642580790558062	0.658894584093336	0.509963463937474	1	FALSE
Selenomonas sp._HMT_919 (SP368) 	-0.640251348118969	0.768789819564702	-0.832804144677003	0.404955196845115	1	FALSE
Solobacterium moorei (SP369) 	-0.299506525803702	0.891811274639012	-0.33584070343239	0.736990994140442	1	FALSE
Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP376) 	0.0932497175902765	0.618340343371628	0.150806458918422	0.88012839106182	1	FALSE
Treponema sp._HMT_237 (SP4) 	-0.500642117001655	0.69965525584958	-0.715555429357467	0.474265903128342	1	FALSE
Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP40) 	-1.23521496649053	1.18431981817165	-1.04297415912322	0.296960260984882	1	FALSE
Bifidobacterium dentium (SP401) 	1.29198829908357	0.641555726273571	2.01383643878917	0	0	TRUE
Granulicatella adiacens (SP42) 	-1.06850613886026	1.26865052578899	-0.842238360478149	0.399654545674908	1	FALSE
Streptococcus constellatus (SP45) 	0.510051951022893	1.06762701903232	0.477743577045471	0.632832724384009	1	FALSE
Anaeroglobus geminatus (SP46) 	-0.0478921390390801	0.79670485260655	-0.0601127743635465	0.952065815892307	1	FALSE
Capnocytophaga gingivalis (SP47) 	0.461473767908109	0.992868513538654	0.464788400090747	0.642082995532239	1	FALSE
Actinomyces sp._HMT_897 (SP5) 	-0.30314813709236	1.04428366923684	-0.290292902228281	0.771592168381794	1	FALSE
Veillonella parvula (SP50) 	-1.21459891033354	1.31783360540444	-0.921663330903434	0.356704213192412	1	FALSE
Streptococcus cristatus (SP51) 	-0.70782867165343	1.10677708473563	-0.63954041099659	0.522471433406108	1	FALSE
Bergeyella sp._HMT_322 (SP52) 	-1.08276139395884	0.839755781028325	-1.28937652877238	0.19726721717276	1	FALSE
Streptococcus gordonii (SP53) 	-0.698397744490508	1.48446680841403	-0.470470434591029	0.638018952432037	1	FALSE
Cardiobacterium hominis (SP54) 	0.770739078868248	0.89738821214768	0.858869181068996	0.390412694236793	1	FALSE
Porphyromonas pasteri (SP55) 	0.948549002459886	0.690229884989197	1.37425084466566	0.169363820875527	1	FALSE
Dialister invisus (SP56) 	-0.333821674606973	0.957128198780571	-0.348774255143959	0.727258792619594	1	FALSE
Peptococcus sp._HMT_167 (SP57) 	0.185558648139529	0.717160342324596	0.258740810371724	0.795835229349787	1	FALSE
Fretibacterium sp._HMT_360 (SP58) 	1.22922438343029	0.648082849195955	1.89670870777607	0	0	TRUE
Prevotella maculosa (SP59) 	-0.467875466551948	0.859354165612807	-0.544450105991289	0.58613177371751	1	FALSE
Prevotella sp._HMT_317 (SP6) 	-0.187111433603963	0.933721958589811	-0.200393095484822	0.841173158979747	1	FALSE
Treponema socranskii (SP60) 	-0.206027933605575	1.02645654782186	-0.200717637821851	0.84091936739144	1	FALSE
Prevotella oris (SP63) 	-0.287405291170054	1.09580560821806	-0.262277623891173	0.793107411897451	1	FALSE
Actinomyces dentalis (SP69) 	1.25547513056694	1.20378818620872	1.04293690945831	0.296977513768043	1	FALSE
Veillonella atypica (SP7) 	0.287372785923612	0.71687142912762	0.40087074787361	0.688515287653485	1	FALSE
Prevotella sp._HMT_314 (SP70) 	-0.0799010782363527	0.899336826699389	-0.0888444416644135	0.929205537975093	1	FALSE
Treponema sp._HMT_231 (SP74) 	1.55684804236633	0.774589695687074	2.0099002749906	0.0444417446577145	1	FALSE
Prevotella sp._HMT_300 (SP75) 	-0.179265364340118	0.908679463364106	-0.197281188326237	0.843607499601121	1	FALSE
Actinomyces sp._HMT_175 (SP77) 	-0.716947336909154	1.06304660289489	-0.674427005322966	0.500039878545278	1	FALSE
Capnocytophaga ochracea (SP78) 	0.273864538258292	0.658586726710949	0.41583671087026	0.677529493735828	1	FALSE
Alloprevotella tannerae (SP79) 	-0.39905200628987	1.11919874584513	-0.356551513099255	0.721427581524448	1	FALSE
Haemophilus parainfluenzae (SP81) 	-0.30024179924985	1.38937761853348	-0.216098053721897	0.828911316779351	1	FALSE
Campylobacter concisus (SP84) 	1.17414005421607	0.827281231398698	1.41927558568074	0.155818687023954	1	FALSE
Actinomyces oris (SP85) 	-0.183230017026946	1.00488317804532	-0.182339620196809	0.855316207404063	1	FALSE
Bacteroidetes_[G-5] bacterium_HMT_511 (SP86) 	0.3002523718648	0.727572951736448	0.412676654826446	0.679843531077354	1	FALSE
Prevotella pallens (SP87) 	-0.575556840178096	0.661156326854287	-0.870530639730147	0.384010482446167	1	FALSE
Streptococcus sp._HMT_064 (SP88) 	-0.295526846702753	0.932874457723455	-0.316791658573163	0.751401693973961	1	FALSE
Actinomyces sp._HMT_169 (SP9) 	1.65543423729059	1.30885896093605	1.2647919192964	0.205945928857615	1	FALSE
Selenomonas noxia (SP90) 	-0.119487030600015	1.08448974431619	-0.110178110236861	0.912268122070167	1	FALSE
Actinomyces sp._HMT_525 (SP91) 	-0.117261211252565	0.958389616514956	-0.122352338998588	0.902619982799851	1	FALSE
Actinomyces sp._HMT_171 (SP93) 	1.12113796085676	1.14092759591725	0.982654784465461	0.325777371405463	1	FALSE
Treponema amylovorum (SP94) 	-0.440250733264346	0.743084191873003	-0.592464135395827	0.553539830062493	1	FALSE
Leptotrichia wadei (SP99) 	-0.224681132306754	1.14345296031772	-0.196493550766028	0.8442238800221	1	FALSE
Prevotella sp._HMT_305_nov_93.898% (SPN122) 	0.198535052430473	0.772856816177366	0.256884649620415	0.797267820866785	1	FALSE
Actinomyces sp._HMT_175_nov_97.633% (SPN133) 	-0.317499114688288	0.976408276301275	-0.325170446005439	0.745052074969509	1	FALSE
Selenomonas infelix_nov_97.248% (SPN2) 	0.210665571751828	0.583638208575413	0.360952330838715	0.71813508253726	1	FALSE
Actinomyces viscosus_nov_95.849% (SPN249) 	0.427109267361147	0.831996299328489	0.513354768171289	0.607703179559973	1	FALSE
Fusobacterium nucleatum_nov_97.018% (SPN283) 	-0.188126347962156	0.729089073018795	-0.258029306602029	0.796384289459073	1	FALSE
Bacteroidetes_[G-3] bacterium_HMT_365_nov_97.244% (SPN297) 	0.470936489595006	0.63321109384664	0.743727477568584	0.457041362525779	1	FALSE
Capnocytophaga gingivalis_nov_97.665% (SPN39) 	-0.513343952216765	0.607259324596292	-0.845345524431492	0.397917950311948	1	FALSE
Corynebacterium matruchotii_nov_97.446% (SPN596) 	0.186965136541183	0.742746587720889	0.251721299878178	0.801256492097657	1	FALSE
Prevotella veroralis_nov_96.402% (SPN608) 	-0.0777432275077659	0.679979061926877	-0.114331796169521	0.908974778053982	1	FALSE
Prevotella sp._HMT_292_sp._HMT_300 (SPP26) 	-0.413880330713839	0.900569103032969	-0.459576427083672	0.645820282527333	1	FALSE
Tannerella serpentiformis_sp._HMT_286 (SPP31) 	-1.2872924409098	0.703281247636216	-1.830409164522	0	0	TRUE
Streptococcus infantis_infantis_clade_638 (SPP45) 	0.907002295203198	0.579978739071597	1.56385438655059	0	0	TRUE
Veillonella dispar_parvula (SPP5) 	-1.68479300899969	0.991626557320427	-1.69901965267281	0.0893154807570812	1	FALSE
